Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2141171	2141188	18	2 [1]	[1] 2	yegD	molecular chaperone

GCAAACTGTTCAGTGGCGGTCATGCGTGACGGTAAACCGCATTTGCTAAAAATGGAAAACGACAGCACGCTGCTGCCTTCAATGCTTTGCGCGCCAA  >  NZ_CP009273/2141182‑2141278        |                                                                                          gCAAACTGTTCAGTGGCGGTCATGCGGGACGGGAAAACGCATTTTCTAAAAATGGAAAAAGACAACACGCTGCTGCCCTCAATTCTTTgc         >  1:220658/1‑90 (MQ=255)        gTTCAGTGGCGGTCATGCGTGACGGGAAACCGCATTTTCTAAAAAAGGAAAAAGACAGCACGCTGCTGCCTTCAATGCTTTGCGCGCCaa  >  1:178498/1‑90 (MQ=255)        |                                                                                          GCAAACTGTTCAGTGGCGGTCATGCGTGACGGTAAACCGCATTTGCTAAAAATGGAAAACGACAGCACGCTGCTGCCTTCAATGCTTTGCGCGCCAA  >  NZ_CP009273/2141182‑2141278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑