Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3798225	3798236	12	2 [1]	[1] 2	rfaS	LPS core biosynthesis protein RfaS

TTGATACCTTTATTAACAACACTGTCATTAATGATAATTATGTCATCTTTTTTAATATCATTGAGGTAATGCTTGATGAATAATCGCCCCAGCCA  >  NZ_CP009273/3798232‑3798326      |                                                                                          ttGATACCTTTATTAACAACACTGTCATTAATGATAATTATGTCATCTTTTTTAATATCATTGAGGTAATGCTTGATGAATAATCGcccc       <  2:139972/90‑1 (MQ=255)      aCCTTTATTAACAACACTGTCATTAATGATAATTATGTCATCTTTTTTAATATCATTGAGGTAATGCTTGATGAATAATCGCCCCAGCCa  <  1:243829/90‑1 (MQ=255)      |                                                                                          TTGATACCTTTATTAACAACACTGTCATTAATGATAATTATGTCATCTTTTTTAATATCATTGAGGTAATGCTTGATGAATAATCGCCCCAGCCA  >  NZ_CP009273/3798232‑3798326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑