Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1338719	1338761	43	3 [1]	[1] 2	BW25113_RS06720	hypothetical protein

CTTAATAAAAAAATACTGACGCGCCGGGCATCCTCAAATAGGAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGATGTC  >  NZ_CP009273/1338631‑1338722                                                                                        |     cTTAATAAAAAAATACTGACGCGCCGGGCATCCTCAAATAGGAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGa      <  1:17754/88‑1 (MQ=255) cTTAATAAAAAAATACTGACGCGCCGGGCATCCTCAAATAGGAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGa      >  2:17754/1‑88 (MQ=255)   taataaAAAAATACTGACGCGCCGGGCATCCTCAAATAGGGAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGATGTc  >  2:104526/1‑90 (MQ=255)                                                                                        |     CTTAATAAAAAAATACTGACGCGCCGGGCATCCTCAAATAGGAAAACCTGAAGGCACGATTGTTAAATCTCCCACGGTGCCTTCGGGATGTC  >  NZ_CP009273/1338631‑1338722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑