Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2088648	2088731	84	3 [1]	[1] 2	hisA	1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino]imidazole‑4‑ carboxamide isomerase

TTCTGGTGCCGCTGGTGCTAAGTTGCTGAAAAACTTCCTGGAGATGTGATGATTATTCCGGCATTAGATTTAATCGACGGCACTGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGCAGGATTACGCCGCGC  >  NZ_CP009273/2088558‑2088726                                                                                          |                                                                                ttCTGGTGCCGCTGGTGCTAAGTTGCTGAAAAACTTCCTGGAGATGTGATGATTATTCCGGCATTAGATTTAATCGACGGCACTgtggtg                                                                                 <  2:253947/90‑1 (MQ=255) ttCTGGTGCCGCTGGTGCTAAGTTGCTGAAAAACTTCCTGGAGATGTGATGATTATTCCGGCATTAGATTTAATCGACGGCACTgtggtg                                                                                 <  2:80474/90‑1 (MQ=255)                                                                                gCACTGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGCAGGATTACGCCgcgc  <  1:239255/90‑1 (MQ=255)                                                                                          |                                                                                TTCTGGTGCCGCTGGTGCTAAGTTGCTGAAAAACTTCCTGGAGATGTGATGATTATTCCGGCATTAGATTTAATCGACGGCACTGTGGTGCGTCTCCATCAGGGCGATTACGGCAAACAGCGCGATTACGGTAACGACCCGCTGCCGCGATTGCAGGATTACGCCGCGC  >  NZ_CP009273/2088558‑2088726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑