Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2214653	2214686	34	5 [1]	[1] 2	bglX	beta‑glucosidase BglX

CGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAAAGCCCCACTGGTCGCGCAGAACATCTTTCAG  >  NZ_CP009273/2214572‑2214661                                                                                 |          cgTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAAAGCCCCACTGGTCGCGCAGAACATCTTTcag  <  2:157949/90‑1 (MQ=255)            tAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAAAGCCCCACTGGTCGCGCAGAAc           >  1:232985/1‑70 (MQ=255)            tAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAAAGCCCCACTGGTCGCGCAGAAc           <  2:232985/70‑1 (MQ=255)                                       cGGAAACGGTGATGCCTTTAAAGCCCCACTGGTCGCGCAGAAc           >  1:188760/1‑43 (MQ=255)                                       cGGAAACGGTGATGCCTTTAAAGCCCCACTGGTCGCGCAGAAc           <  2:188760/43‑1 (MQ=255)                                                                                 |          CGTGCCATGTTTAATCAGCTCTTTGATTGCACCGTGATCGGAAACGGTGATGCCTTTAAAGCCCCACTGGTCGCGCAGAACATCTTTCAG  >  NZ_CP009273/2214572‑2214661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑