Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 2658721 2658795 75 2 [1] [1] 2 [csiE] [csiE]

CACAAAACCACCTTAAGACATGCTAATCCACTGGTCAGAACAGTTTAAGATGAGAAAAATTCTGTGACGCTTGCCAACATTTCTGATGATTAGCATTCCCTTCGCCATTTCCTTGAGCAAACTTTAGCTATT  >  NZ_CP009273/2658631‑2658762
                                                                                         |                                          
cacaAAACCACCTTAAGACATGCTAATCCACTGGTCAGAACAGTTTAAGATGAGAAAAATTCTGTGACGCTTGCCAACATTTCTgatgat                                            <  1:225531/90‑1 (MQ=255)
                                          gTTTAAGATGAGAAAAATTCTGTGACGCTTGCCAACATTTCTGATGATTAGCATTCCCTTCGCCATTTCCTTGAGCAAACTTTAGCTAtt  >  1:144555/1‑90 (MQ=255)
                                                                                         |                                          
CACAAAACCACCTTAAGACATGCTAATCCACTGGTCAGAACAGTTTAAGATGAGAAAAATTCTGTGACGCTTGCCAACATTTCTGATGATTAGCATTCCCTTCGCCATTTCCTTGAGCAAACTTTAGCTATT  >  NZ_CP009273/2658631‑2658762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: