Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3136965	3136967	3	2 [1]	[0] 2	hybB	Ni/Fe‑hydrogenase cytochrome b subunit

CCGTCAGCAGCGAGAACAGCGGCAACATTTCATAGCTCTGCCACAACGGATGCACCTTGTAGCCCGCCGAGATCATCAGCGACCCCATTGA  >  NZ_CP009273/3136875‑3136965                                                                                          |  ccGTCAGCAGCGGGAACAGCGGCAACATTTCATAGCTCTGCCACAACGGATGCACCTTGTAGCCCGCCGAGATCATCAGCGACCCCATTg   <  1:49884/90‑1 (MQ=255)  cGTCAGCAGCGAGAACAGCGGCAACATTTCATAGCTCTGCCACAACGGATGCACCTTGTAGCCCGCCGAGATCATCAGCGACCCCATTGa  >  1:133184/1‑90 (MQ=255)                                                                                          |  CCGTCAGCAGCGAGAACAGCGGCAACATTTCATAGCTCTGCCACAACGGATGCACCTTGTAGCCCGCCGAGATCATCAGCGACCCCATTGA  >  NZ_CP009273/3136875‑3136965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑