Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1615977	1616005	29	2 [1]	[0] 2	ydeE	efflux MFS transporter YdeE

ATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCA  >  NZ_CP009273/1616006‑1616045 |                                        aTGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCa  <  1:52289/40‑1 (MQ=255) aTGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCa  >  2:52289/1‑40 (MQ=255) |                                        ATGCTAAACATTGGCTGGACCATCGGTCCGCCGCTCGGCA  >  NZ_CP009273/1616006‑1616045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑