Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1684769	1684790	22	3 [0]	[1] 3	ydgA	YdgA family protein

GCTGGCAAGTTTTGGTGAGCGTGTAGGAAATCAAAAACTGTCACTGGAAAAAATGACCATTTCAGTGGAAGGCAAAGAACTGGCACTGCTG  >  NZ_CP009273/1684780‑1684870            |                                                                                gCTGGCAAGTTTTGGTGAGCGTGTAGGAAATCAAAAACTGTCACTGGAAAAAATGACCATTTCAGTGGAAGGCAAAGAACTGGCActgct   >  1:170629/1‑90 (MQ=255)            ttGGTGAGCGTGTAGGAAATCAAAAACTGTCACTGGAAAAAATGACCATTTCAGTGGAAGGCAAAGAACTGGCActgctg  >  1:241191/1‑80 (MQ=255)            ttGGTGAGCGTGTAGGAAATCAAAAACTGTCACTGGAAAAAATGACCATTTCAGTGGAAGGCAAAGAACTGGCActgctg  <  2:241191/80‑1 (MQ=255)            |                                                                                GCTGGCAAGTTTTGGTGAGCGTGTAGGAAATCAAAAACTGTCACTGGAAAAAATGACCATTTCAGTGGAAGGCAAAGAACTGGCACTGCTG  >  NZ_CP009273/1684780‑1684870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑