Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1792664	1792729	66	2 [1]	[1] 2	pheS	phenylalanine‑‑tRNA ligase subunit alpha

GAAAGTGTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAGCATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCC  >  NZ_CP009273/1792726‑1792819     |                                                                                          gAAAGTGTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAGCATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGt      >  2:197823/1‑90 (MQ=255)     gtgtCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAGCATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGcc  <  2:219279/90‑1 (MQ=255)     |                                                                                          GAAAGTGTCGTGGTCAGCGCGCGCCGGGTGGTGACCAGGAATGTTCAGAGCATCGAAGTTATGATAATCGTCTTCGATTTCCGGCCCGGTTGCC  >  NZ_CP009273/1792726‑1792819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑