Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1965502	1965530	29	2 [1]	[1] 2	tar	methyl‑accepting chemotaxis protein II

GAAACCGCCAATGCGACTTGAT‑CGATGCCACGGCTCTGTTCATCCGATGCCGATGCAATCTCGCCCATAATGTCAGTCACGCGAGTGACAGCATTGAC  >  NZ_CP009273/1965522‑1965619          |                                                                                          gAAACCGCCAATGCGACTTGAT‑CGATGCCACGGCTCTGTTCATCCGATGCCGATGCAATCTCGCCCATAATGTCAGTCACGCGAGTGACa          >  2:44427/1‑90 (MQ=255)          aaTGCGACTTGATCCGATGCCACGGCTCTGTTCATCCGATGCCGATGCAATCTCGCCCATAATGTCAGTCACGCGAGTGACAGCATTGAc  <  2:197266/90‑1 (MQ=255)          |                                                                                          GAAACCGCCAATGCGACTTGAT‑CGATGCCACGGCTCTGTTCATCCGATGCCGATGCAATCTCGCCCATAATGTCAGTCACGCGAGTGACAGCATTGAC  >  NZ_CP009273/1965522‑1965619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑