Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2541323	2541327	5	2 [1]	[1] 3	murP	PTS N‑acetylmuramic acid transporter subunit IIBC

CGCTGCCGCTGATGACTTCCGCACAAGGCATCCTTCCGGCCATGGCGGTTTATGCTGGCGGGATTCTGGTGGCATGGGTTTGCGGGTTTA  >  NZ_CP009273/2541323‑2541412      |                                                                                     acaggCCGCTGATGACTTCCGCACAAGGCATCCTTCCGGCCATGGCGGTTTATGCTGGCGGGATTCTGGTGGCATGGGTTTGCGGGTTTa  <  1:199121/86‑1 (MQ=255)      ccGCTGATGACTTCCGCACAAGGCATCCTTCCGGCCATGGc                                              >  1:125417/1‑41 (MQ=255)      ccGCTGATGACTTCCGCACAAGGCATCCTTCCGGCCATGGc                                              <  2:125417/41‑1 (MQ=255)      |                                                                                     CGCTGCCGCTGATGACTTCCGCACAAGGCATCCTTCCGGCCATGGCGGTTTATGCTGGCGGGATTCTGGTGGCATGGGTTTGCGGGTTTA  >  NZ_CP009273/2541323‑2541412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑