Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2608630	2608649	20	3 [0]	[1] 2	yfgO	AI‑2E family transporter

GCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAG  >  NZ_CP009273/2608648‑2608739   |                                                                                          gCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcacc    <  2:208155/90‑1 (MQ=255)   cAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGgcaccag  >  1:288144/1‑90 (MQ=255)   |                                                                                          GCCAGCCCACGGTTACGCGGCAGCACCCGGCGAACGGCGTTCAGCATCTGCTCTTTGTCTTTCAGCAGGAAGAAGACCATCAATGGCACCAG  >  NZ_CP009273/2608648‑2608739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑