Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2746774	2746804	31	6 [1]	[1] 2	recN	DNA repair protein RecN

GAATGCGAAAGAACTGCTTGCAGCGTAAACTTTTTTCCTGCTTCACGGTCAGAGTAAACAGCAAAACGCCGTAAGACCGGAAAGCAAAAGGTTTTAAAGTGATGAAA  >  NZ_CP009273/2746788‑2746894                  |                                                                                          gAATGCGAAAGAACTGCTTGCAGCGTAAACTTTTTTCCTGCTTCACGGTCAGAGTAAACAGCAAAACGCCGTAAGACCGGAAAGCAAAAg                   >  2:186346/1‑90 (MQ=255)                  ttGCAGCGTAAACTTTTTTCCTGCTTCACGGTCAGAGTAAACAGCAAAACGCCGTAAGACCGGAAAGCAAAAGGTTTTAAAGTGATGaaa  <  1:227006/90‑1 (MQ=255)                  |                                                                                          GAATGCGAAAGAACTGCTTGCAGCGTAAACTTTTTTCCTGCTTCACGGTCAGAGTAAACAGCAAAACGCCGTAAGACCGGAAAGCAAAAGGTTTTAAAGTGATGAAA  >  NZ_CP009273/2746788‑2746894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑