Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3396428	3396438	11	3 [0]	[0] 3	csrD	RNase E specificity factor CsrD

GTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGACATCATTAATTCGGTAATTTGTGGCCTTAATACGCTGAAGTCATTCG  >  NZ_CP009273/3396439‑3396528 |                                                                                          gTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGACATCATTAATTCGGTAATTtgtg                          >  1:23596/1‑66 (MQ=255) gTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGACATCATTAATTCGGTAATTtgtg                          <  2:23596/66‑1 (MQ=255) gTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGACATCATTAATTCGGTAATTTGTGGCCTTAATACGCTGAAGTCATTCg  >  2:9888/1‑90 (MQ=255) |                                                                                          GTTTATCACCATGGAGCAGGTCTACACGAACGATATCTGCCGACATCATTAATTCGGTAATTTGTGGCCTTAATACGCTGAAGTCATTCG  >  NZ_CP009273/3396439‑3396528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑