Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3646776	3646789	14	2 [0]	[1] 3	BW25113_RS18165	hypothetical protein

ATACAATGACATATTAAAATATCAGCAAGAATTCCAAAGACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAA  >  NZ_CP009273/3646782‑3646871         |                                                                                  aTACAATGACATATTAAAATATCAGCAAGAATTCCAAAGACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCTATACAATaa  >  1:77192/1‑90 (MQ=255)         aCATATTAAAATATCAGCAAGAATTCCAAAGACAATGTTATAAGc                                       <  1:76685/45‑1 (MQ=255)         aCATATTAAAATATCAGCAAGAATTCCAAAGACAATGTTATAAGc                                       >  2:76685/1‑45 (MQ=255)         |                                                                                  ATACAATGACATATTAAAATATCAGCAAGAATTCCAAAGACAATGTTATAAGCAAGTTAAAGCCTTTACGACACTCTCCCGATACAATAA  >  NZ_CP009273/3646782‑3646871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑