Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1046847	1046855	9	3 [0]	[0] 2	cspH/cspG	cold shock‑like protein CspH/cold shock protein CspG

CTAAGTAGTTTCTGTATTAAAGCCCTGTTTGCCGAAAGGCCCA  >  NZ_CP009273/1046856‑1046898 |                                           cTAAGTAGTTTCTGTATTAAAGCCCTGTTTGCCGAAAGGCCCa  <  1:78390/43‑1 (MQ=255) cTAAGTAGTTTCTGTATTAAAGCCCTGTTTGCCGAAAGGCCCa  >  2:78390/1‑43 (MQ=255) |                                           CTAAGTAGTTTCTGTATTAAAGCCCTGTTTGCCGAAAGGCCCA  >  NZ_CP009273/1046856‑1046898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑