Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1189399	1189454	56	2 [1]	[0] 2	nudJ	phosphatase NudJ

TGAGGCTGGGTCGGGCATATTTGCTCAAGCTCAATGGCAAAGAGGAAACGCAAAAACGGCGTTTTATCTGGCGCAATCCACTGATGCATA  >  NZ_CP009273/1189455‑1189544 |                                                                                          tGAGGCTGGGTCGGGCATATTTGCTCAAGCTCAATGGCAAAGAGGAAACGCAAAAACGGCGTTTTATCTGGCGCAATCCACTGATGCATa  <  2:33715/90‑1 (MQ=255) tGAGGCTGGGTCGGGCATATTTGCTCAAGCTCAATGGCAAAGAGGAAACGCAAAAACGGCGTTTTATCTGGCGCAATCCACTGATGCATa  <  2:9525/90‑1 (MQ=255) |                                                                                          TGAGGCTGGGTCGGGCATATTTGCTCAAGCTCAATGGCAAAGAGGAAACGCAAAAACGGCGTTTTATCTGGCGCAATCCACTGATGCATA  >  NZ_CP009273/1189455‑1189544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑