Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	824970	824981	12	2 [1]	[1] 2	hlyD	secretion protein HlyD

CTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAG  >  NZ_CP009273/824880‑824970                                                                                          |  cTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCga   <  2:126354/90‑1 (MQ=255)  tGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCgag  >  1:244617/1‑90 (MQ=255)                                                                                          |  CTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAG  >  NZ_CP009273/824880‑824970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑