Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1051016	1051040	25	3 [0]	[1] 2	torS	TMAO reductase system sensor histidine kinase/response regulator TorS

TGAGCTGCTTTTCCAGCGTTGGTGCATTTTTCTGGATCTGCTCCAGCCCCAGATTCATCACCATTTGCTGCACCCGCAGAGCGCTAAGGC  >  NZ_CP009273/1050926‑1051015                                                                                          | tGAGCTGCTTTTCCAGCGTTGGTGCATTTTTCTGGATCTGCTCCAGCCCCAGATTCATCACCATTTGCTGCACCCGCAGAGCGCTAAGgc  <  1:184998/90‑1 (MQ=255)                                             aGCCCCAGATTCATCACCATTTGCTGCACCCGCAGAGCGCTAAGgc  >  1:198573/1‑46 (MQ=255)                                             aGCCCCAGATTCATCACCATTTGCTGCACCCGCAGAGCGCTAAGgc  <  2:198573/46‑1 (MQ=255)                                                                                          | TGAGCTGCTTTTCCAGCGTTGGTGCATTTTTCTGGATCTGCTCCAGCCCCAGATTCATCACCATTTGCTGCACCCGCAGAGCGCTAAGGC  >  NZ_CP009273/1050926‑1051015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑