Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1584049	1584072	24	3 [1]	[1] 2	ydeT	fimbria/pilus outer membrane usher protein

CGAGTAAATGATCCCGATCGTTTTGCCATATATTATTGGAATAGCTGTAATTCAGCGAAGTCGTAATATCACCAAACGGCACATTTAATC  >  NZ_CP009273/1583964‑1584053                                                                                     |      cGAGTAAATGATCCCGATCGTTTTGCCATATATTATTGGAATAGCTGTAATTCAGCGAAGTCGTAATATCACCAAACGGCACATTTAATc  <  2:215286/90‑1 (MQ=255)                              atatTATTGGAATAGCTGTAATTCAGCGAAGTCGTAATATCACCAAACGGCACAtt       <  1:52592/56‑1 (MQ=255)                              atatTATTGGAATAGCTGTAATTCAGCGAAGTCGTAATATCACCAAACGGCACAtt       >  2:52592/1‑56 (MQ=255)                                                                                     |      CGAGTAAATGATCCCGATCGTTTTGCCATATATTATTGGAATAGCTGTAATTCAGCGAAGTCGTAATATCACCAAACGGCACATTTAATC  >  NZ_CP009273/1583964‑1584053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑