Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2808183	2808183	1	2 [0]	[0] 2	luxS/gshA	S‑ribosylhomocysteine lyase/glutamate‑‑cysteine ligase

GAGTCTGAGTATATGAAAGACGCGCATTTGTTATCA  >  NZ_CP009273/2808147‑2808182                                    | gAGTCTGAGTATATGAAAGACGCGCATTTGTTatca  <  1:60269/36‑1 (MQ=255) gAGTCTGAGTATATGAAAGACGCGCATTTGTTatca  >  2:60269/1‑36 (MQ=255)                                    | GAGTCTGAGTATATGAAAGACGCGCATTTGTTATCA  >  NZ_CP009273/2808147‑2808182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑