Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1459470	1459591	122	2 [1]	[1] 2	[BW25113_RS25580]	[BW25113_RS25580]

TTCTATGTTTTAAATAACTAATTGGTCGGGTTAGTGCATCCGGCTTTCTTTATATTCGCCAGAAGGATTTATTATGCAAAGGAAAACTCTATTGTCGGCCTGTATT  >  NZ_CP009273/1459576‑1459681                 |                                                                                          ttctATGTTTTAAATAACTAATTGGTCGGGTTAGTGCATCCGGCTTTCTTTATATTCGCCAGAAGGATTTATTATGCAAAGGAAAActct                  >  1:38859/1‑90 (MQ=255)                 aCTAATTGGTCGGGTTAGTGCATCCGGCTTTCTTTATATTCGCCAGAAGGATTTATTATGCAAAGGAAAACTCTATTGTCGGCCTGTAtt  <  1:45693/90‑1 (MQ=255)                 |                                                                                          TTCTATGTTTTAAATAACTAATTGGTCGGGTTAGTGCATCCGGCTTTCTTTATATTCGCCAGAAGGATTTATTATGCAAAGGAAAACTCTATTGTCGGCCTGTATT  >  NZ_CP009273/1459576‑1459681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑