Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1772983	1773027	45	3 [1]	[1] 2	ydiP	AraC family transcriptional regulator

TTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGA  >  NZ_CP009273/1773025‑1773117    |                                                                                          ttttttAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATaa     >  1:112875/1‑90 (MQ=255)    tttAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGa  >  1:207133/1‑90 (MQ=255)    |                                                                                          TTTTTTAATATACCCCTGCTCCGAACGATAAGCATTTTTAAAATTTTCGTAGTAAAGAATGGCTAACGTATAGGCAAATGCATCCCATAACGA  >  NZ_CP009273/1773025‑1773117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑