Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2404079	2404116	38	2 [1]	[1] 2	yfbS	SLC13 family permease

GATCCGGGGCGAATAGCCAGACGTCGCGCACGCCCGGTCAGTCGATATTCACGGATAAGATCGCGAAAGGTTCGACGCGTCCAGCCTTCGC  >  NZ_CP009273/2404116‑2404206  |                                                                                          gATCCGGGGCGAATAGCCAGACGTCGCGCACGCCCGGTCAGTCGATATTCACGGATAAGATCGCGAAAGGTTCGACGCGTCCAGCCTTcg   >  2:193041/1‑90 (MQ=255)  aTCCGGGGCGAATAGCCAGACCTCGCGCACGCCCGGTCAGGCGATATTCACGGATAAGATCGCGAAAGGATCGACGCGGCCAGCCTTcgc  >  2:217076/1‑90 (MQ=255)  |                                                                                          GATCCGGGGCGAATAGCCAGACGTCGCGCACGCCCGGTCAGTCGATATTCACGGATAAGATCGCGAAAGGTTCGACGCGTCCAGCCTTCGC  >  NZ_CP009273/2404116‑2404206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑