Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3538381	3538387	7	2 [1]	[0] 2	gntX	DNA utilization protein GntX

CCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCAC  >  NZ_CP009273/3538388‑3538477 |                                                                                          cccTGCGGTCGCTGCCTGCAAAACCCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATccac  <  2:65275/90‑1 (MQ=255) cccTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATccac  >  1:65368/1‑90 (MQ=255) |                                                                                          CCCTGCGGTCGCTGCCTGCAAAAACCGCCGCCCTGGCAAAGACTGGTCACGGTTGCCGACTATGCGCCGCCGTTAAGTCCGCTTATCCAC  >  NZ_CP009273/3538388‑3538477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑