Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4005890	4005900	11	2 [0]	[1] 2	metR	HTH‑type transcriptional regulator MetR

ATGCGCAGACGCGTCTGCTGCGGTTCATTGCAGGCTTGCAGGGCCTGGCTAATTTGCGGCAGTACCTGGTTTGCCAGTTGCAACAGGATTTC  >  NZ_CP009273/4005899‑4005990   |                                                                                          aTGCGCAGACGCGTCTGCTGCGGTTCATTGCAGGCTTGCAGGGCCTGGCTAATTTGCGGCAGTACCTGGTTTGCCAGTTGCAACAGGAtt    >  1:167186/1‑90 (MQ=255)   gcgcAGACGCGTCTGCTGCGGTTCATTGCAGGCTTGCAGGGCCTGGCTAATTTGCGGCAGTACCTGGTTTGCCAGTTGCAACAGGATTtc  >  1:247859/1‑90 (MQ=255)   |                                                                                          ATGCGCAGACGCGTCTGCTGCGGTTCATTGCAGGCTTGCAGGGCCTGGCTAATTTGCGGCAGTACCTGGTTTGCCAGTTGCAACAGGATTTC  >  NZ_CP009273/4005899‑4005990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑