Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2764907	2764922	16	3 [1]	[0] 2	BW25113_RS13755	hypothetical protein

GTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAAC  >  NZ_CP009273/2764817‑2764914                                                                                          |         gTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGAt          <  1:166311/90‑1 (MQ=255) gTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGAt          <  2:31744/90‑1 (MQ=255)         gaTAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAAc  >  2:331740/1‑90 (MQ=255)                                                                                          |         GTAACGGAGATAATGCCTGGTTCAGCTTCATCATGGATATCCGTAAGGCCCGGCAGTTCGACGTCTACGTCAATGACCAGAAAGTTGGATCGTTTAAC  >  NZ_CP009273/2764817‑2764914

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑