Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3548791	3548812	22	3 [0]	[1] 2	malT	HTH‑type transcriptional regulator MalT

CTGCCGGAACTGGAACAGCATCGCGCGCAGCGTATTCTGCGAGAAATCAATCAACATCATCGGCATAAATTCGCCCATTTCGATGAGAATTTCGTTGAACG  >  NZ_CP009273/3548802‑3548902            |                                                                                          cTGCCGGAACTGGAACAGCATCGCGCGCAGCGTATTCTGCGAGAAATCAATCAACATCATCGGCATAAATTCGCCCATTTCGATGAGAAt             >  1:284707/1‑90 (MQ=255)            ggAACAGCATCGCGCGCAGCGTATTCTGCGAGAAATCAATCAACATCATCGGCATAAATTCGCCCATTTCGATGAGAATTTCGTTGAACg  <  1:197440/90‑1 (MQ=255)            |                                                                                          CTGCCGGAACTGGAACAGCATCGCGCGCAGCGTATTCTGCGAGAAATCAATCAACATCATCGGCATAAATTCGCCCATTTCGATGAGAATTTCGTTGAACG  >  NZ_CP009273/3548802‑3548902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑