Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1205758	1205771	14	3 [1]	[1] 2	pinE/mcrA	site‑specific DNA recombinase/5‑methylcytosine‑specific endonuclease McrA

TAGTATTGTCGTGAAAAATTGATTAAAGATTAATATTATGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAG  >  NZ_CP009273/1205765‑1205861        |                                                                                          tagtaTTGTCGTGAAAAATTGATTAAAGATTAATATTATGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAgg         <  1:201698/90‑1 (MQ=255)        gTCGTGAAAAATTGATTAAAGATTAATATTATGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAagag  >  1:228009/1‑90 (MQ=255)        |                                                                                          TAGTATTGTCGTGAAAAATTGATTAAAGATTAATATTATGCATGTTTTTGATAATAATGGAATTGAACTGAAAGCTGAGTGTTCGATAGGTGAAGAG  >  NZ_CP009273/1205765‑1205861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑