Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3629488	3629670	183	16 [1]	[0] 2	[yhiN]	[yhiN]

AAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGAC  >  NZ_CP009273/3629401‑3629574                                                                                       |                                                                                        aaaGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGgga                                                                                      >  2:28968‑M2/1‑87 (MQ=255)  aaGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaa                                                                                     >  1:412810‑M2/1‑86 (MQ=255)  aaGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaa                                                                                     >  1:67498‑M2/1‑86 (MQ=255)       cTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgc                                                                                >  2:171888‑M2/1‑81 (MQ=255)         ggCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcga                                                                              <  1:149244‑M2/90‑12 (MQ=255)              cTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataag                                                                         <  2:175373‑M2/90‑17 (MQ=255)                     agtTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGgggaggtgcgaataagcggggaa                                                                  <  1:471114‑M2/90‑24 (MQ=255)                                               ttATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                        <  2:104308‑M2/90‑50 (MQ=255)                                                      aaGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                 <  1:356836‑M2/90‑57 (MQ=255)                                                       aGCATGGAGGGTTTCAGTTCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                <  1:27465‑M2/90‑58 (MQ=255)                                                           tGGAGGGTTTCGGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAAtt                            >  2:403093/1‑90 (MQ=255)                                                                         tCACGGGCTCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt              <  2:65732‑M2/90‑76 (MQ=255)                                                                                 tCATTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg      <  1:256448‑M2/90‑84 (MQ=255)                                                                                    ttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaa   <  1:380665‑M2/90‑87 (MQ=255)                                                                                     tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa  >  1:36702‑M2/1‑3 (MQ=255)                                                                                     tAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaa  >  2:309856‑M2/1‑3 (MQ=255)                                                                                       |                                                                                        AAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATCAAAATTAGCTCATTTTTAATGCGACTCTAATAATTTTCATCTTTAGGAAATAGGTCAGGAC  >  NZ_CP009273/3629401‑3629574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑