Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1116440	1116488	49	2 [1]	[1] 3	bssS/dinI	biofilm formation regulator BssS/DNA damage‑inducible protein I

ACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAG  >  NZ_CP009273/1116350‑1116452                                                                                          |              aCGGCGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGAc               <  2:42919/90‑1 (MQ=255)              cccACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAg  >  2:166712/1‑90 (MQ=255)                                                                                          |              ACGGTGCTGATGTCCCACCCTACGAGCGGATGAGTCTGAATGACTTCATTATTTTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAG  >  NZ_CP009273/1116350‑1116452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑