Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1596427	1596436	10	2 [0]	[1] 2	lsrA	autoinducer 2 ABC transporter ATP‑binding protein LsrA

ATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACT  >  NZ_CP009273/1596383‑1596426                                            | aTGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACt  <  1:222451/44‑1 (MQ=255) aTGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACt  >  2:222451/1‑44 (MQ=255)                                            | ATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACT  >  NZ_CP009273/1596383‑1596426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑