Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2016846	2016869	24	2 [0]	[1] 2	fliR	flagellar biosynthetic protein FliR

CATTTATGGTTGATTTCACTGCTGGTCGATACCTTTCACACCCTGC  >  NZ_CP009273/2016800‑2016845                                              | cATTTATGGTTGATTTCACTGCTGGTCGATACCTTTCACACCCTGc  >  1:5321/1‑46 (MQ=255) cATTTATGGTTGATTTCACTGCTGGTCGATACCTTTCACACCCTGc  <  2:5321/46‑1 (MQ=255)                                              | CATTTATGGTTGATTTCACTGCTGGTCGATACCTTTCACACCCTGC  >  NZ_CP009273/2016800‑2016845

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑