Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2839614	2839620	7	2 [1]	[0] 2	hycE	formate hydrogenlyase subunit HycE

ACGGATATTCCGGTTTGTTGGCGTCAACTTCGACGCGAACCGTAATCCAACACTTAGTGCCCTTCTCCATCGACAGCACGTAGTAAACGGCGTAAT  >  NZ_CP009273/2839524‑2839619                                                                                          |       acggaTATTCCGGTTTGTTGGCGTCAACTTCGACGCGAACCGTAATCCAACACTTAGTGCCCTTCTCCATCGACAGCACGTAGTAAACgg        <  1:50498/90‑1 (MQ=255)       atTCCGGTTTGTTGGCGTCAACTTCGACGCGAACCGTAATCCAACACTTAGTGCCCTTCTCCATCGACAGCACGTAGTAAACGGCGTAAt  <  1:144345/90‑1 (MQ=255)                                                                                          |       ACGGATATTCCGGTTTGTTGGCGTCAACTTCGACGCGAACCGTAATCCAACACTTAGTGCCCTTCTCCATCGACAGCACGTAGTAAACGGCGTAAT  >  NZ_CP009273/2839524‑2839619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑