Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3435666	3435693	28	2 [1]	[1] 2	rpsM	30S ribosomal protein S13

GCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTG  >  NZ_CP009273/3435576‑3435677                                                                                          |             gCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAg              <  2:249434/90‑1 (MQ=255)             cATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTg  <  2:193271/90‑1 (MQ=255)                                                                                          |             GCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTG  >  NZ_CP009273/3435576‑3435677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑