Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	984943	984973	31	2 [1]	[1] 2	pncB	nicotinate phosphoribosyltransferase

AGAGTCATGACGCAGGCCCTGATACCGACTAGCGAACTCGACACCGAAATCACGCAGGAAAGCATCCATAGTGATGCAGTCGGTTAATGCAATGCCAAGTTGG  >  NZ_CP009273/984961‑985063              |                                                                                          agagTCATGACGCAGGCCCTGATACCGACTAGCGAACTCGACACCGAAATCACGCAGGAAAGCATCCATAGTGATGCAGTCGGTTaatgc               <  1:54928/90‑1 (MQ=255)              aGGCCCTGATACCGACTAGCGAACTCGACACCGAAATCACGCAGGAAAGCATCCATAGTGATGCAGTCGGTTAATGCAATGCCAAGTTgg  >  2:59228/1‑90 (MQ=255)              |                                                                                          AGAGTCATGACGCAGGCCCTGATACCGACTAGCGAACTCGACACCGAAATCACGCAGGAAAGCATCCATAGTGATGCAGTCGGTTAATGCAATGCCAAGTTGG  >  NZ_CP009273/984961‑985063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑