Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1425057	1425080	24	2 [1]	[1] 2	stfR	prophage tail fiber N‑terminal domain‑containing protein

TGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGGCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAG  >  NZ_CP009273/1425077‑1425170     |                                                                                          tGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGGAAATATCAAAACAATGAACGAGCCATTCACTCAATAatga      <  1:222705/90‑1 (MQ=255)     tggtggCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGGCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAg  >  2:183975/1‑90 (MQ=255)     |                                                                                          TGCCTGGTGGCTGGACTGACAGGGGGCGTTATGCTTATGGCATGTTCTGGCAATATCAAAACAATGAACGAGCCATTCACTCAATAATGATGAG  >  NZ_CP009273/1425077‑1425170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑