Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1678077	1678087	11	3 [0]	[1] 2	rstB	two‑component system sensor histidine kinase RstB

GCGTTGGATATGCGCTTAATGGAGCGCGTGCTGGATAATTTGCTCAATAACGCCCTGCGGTACTGCCATTCAACGGTTGAAACCAGCCTGCTACTGTCGG  >  NZ_CP009273/1678078‑1678177           |                                                                                          gcgTTGGATATGCGCTTAATGGAGCGCGTGCTGGATAATTTGCTCAATAACGCCCTGCGGTACTGCCATTCAACGGTTGAAACCAGCCTg            >  2:67279/1‑90 (MQ=255)           tGCGCTTAATGGAGCGCGTGCTGGATAATTTGCTCAATAACGCCCTGCGGTACTGCCATTCAACGGTTGAAACCAGCCTGCTACTGTCgg  >  2:91611/1‑90 (MQ=255)           |                                                                                          GCGTTGGATATGCGCTTAATGGAGCGCGTGCTGGATAATTTGCTCAATAACGCCCTGCGGTACTGCCATTCAACGGTTGAAACCAGCCTGCTACTGTCGG  >  NZ_CP009273/1678078‑1678177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑