Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2099681	2099753	73	2 [1]	[1] 2	wzy	O16 family O‑antigen polymerase

TCATCAAATAGCTTAGCTCCGCGGAAATATAAACATAATCCGAAAAAGCAGTATAAACATTTGTTGGCAAACCCACCCACACAAATTCTTTATGCAA  >  NZ_CP009273/2099747‑2099843        |                                                                                          tcatcaAATAGCTTAGCTCCGCGGAAATATAAACATAATCCGAAAAAGCAGTATAAACATTTGTTGGCAAACCCACCCACACAAATTCtt         >  2:231341/1‑90 (MQ=255)        aTAGCTTAGCTCCGCGGAAATATAAACATAATCCGAAAAAGCAGTATAAACATTTGTTGGCAAACCCACCCACACAAATTCTTTATGCaa  >  2:203076/1‑90 (MQ=255)        |                                                                                          TCATCAAATAGCTTAGCTCCGCGGAAATATAAACATAATCCGAAAAAGCAGTATAAACATTTGTTGGCAAACCCACCCACACAAATTCTTTATGCAA  >  NZ_CP009273/2099747‑2099843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑