Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2782946	2782974	29	2 [0]	[0] 3	csiD	glutarate dioxygenase GlaH

CGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGA  >  NZ_CP009273/2782975‑2783064 |                                                                                          cGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGa  <  1:49626/90‑1 (MQ=255) cGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGa  <  2:4694/90‑1 (MQ=255) cGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGa  <  2:97819/90‑1 (MQ=255) |                                                                                          CGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGA  >  NZ_CP009273/2782975‑2783064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑