Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3528206	3528218	13	2 [0]	[1] 2	envZ	two‑component system sensor histidine kinase EnvZ

CGTTTGATCGACAGCGGGTGCATTTTCACTTCAATGCTGCCGGGGTAAAGCGCGGTTTCAATTTCCCGCTCATAGCCACTTTCGGCAGCAATCACCT  >  NZ_CP009273/3528212‑3528308        |                                                                                          cgTTTGATCGACAGCGGGTGCATTTTCCCTTCAATGCTGCCGGGGTAAAGCGCGGTTTCAATTTCCCGCTCATAGCCACTTTCGgcagca         <  2:58089/90‑1 (MQ=255)        tCGACAGCGGGTGCATTTTCACTTCAATGCTGCCGGGGTAAAGCGCGGTTTCAATTTCCCGCTCATAGCCACTTTCGGCAGCAAtcacct  <  2:83710/90‑1 (MQ=255)        |                                                                                          CGTTTGATCGACAGCGGGTGCATTTTCACTTCAATGCTGCCGGGGTAAAGCGCGGTTTCAATTTCCCGCTCATAGCCACTTTCGGCAGCAATCACCT  >  NZ_CP009273/3528212‑3528308

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑