| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,047,675 | C→G | A322P (GCG→CCG) | glnG ← | nitrogen regulation protein NR(I) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,047,675 | 0 | C | G | 100.0% | 11.0 / NA | 5 | A322P (GCG→CCG) | glnG | nitrogen regulation protein NR(I) |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (4/1); total (4/1) | |||||||||||
GACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAACCTGTAAAAAATGGCGCGCCAGACGGGGAATATCTTCCCGACGTTCGCGCAGCGGC > NZ_CP009273/4047588‑4047712 | gACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAACCTGTAAAAAATGGCGCGGCa > 1:165135/1‑90 (MQ=255) gTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAACCTGTAAAAAATGGCGCGGCAGACgg > 1:121608/1‑90 (MQ=255) gTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAACCTGTAAAAAATGGCGCGGCAGACgg > 1:143334/1‑90 (MQ=255) gcTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAACCTGTAAAAAATGGCGCGGCAGACGGGGAATATCt > 1:134829/1‑90 (MQ=255) aaCTTCGCTTCTACGCCCAGTTCGCGCGCGGCAACCTGTAAAAAATGGCGCGGCAGACGGGGAATATCTTCCCGACGTTCGCGCAgcggc < 2:57557/90‑1 (MQ=255) | GACGCGTCAGAGCAGCTTCGGTTTCCGGATGCAGTAACTTCGCTTCTACGCCCAGTTCGCGCGCGGCAACCTGTAAAAAATGGCGCGCCAGACGGGGAATATCTTCCCGACGTTCGCGCAGCGGC > NZ_CP009273/4047588‑4047712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |