Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3247147	3247151	5	3 [0]	[0] 2	yhaJ	DNA‑binding transcriptional regulator YhaJ

CGTTCATTAACGTATAGAGCTTGCGCGAGTTGATCTCCGACGAGGAACGAAAATGCATATCCGGCGCGATAACAATATCCGCCCGCCCCT  >  NZ_CP009273/3247057‑3247146                                                                                          | cGTTCATTAACGTATAGACCTTGCGCGATTTGATCTCCGACGAGGAACGAAATTGCATATCCGGCGCGATAACAATATCCGCCCGCCCCt  <  1:564121/90‑1 (MQ=255)                   gCTTGCGCGAGTTGATCTCCGACGAGGAACGAAAATGCATATCCGGCGCGATAACAATATCCGCCCGCCCCt  >  1:43326/1‑72 (MQ=255)                   gCTTGCGCGAGTTGATCTCCGACGAGGAACGAAAATGCATATCCGGCGCGATAACAATATCCGCCCGCCCCt  <  2:43326/72‑1 (MQ=255)                                                                                          | CGTTCATTAACGTATAGAGCTTGCGCGAGTTGATCTCCGACGAGGAACGAAAATGCATATCCGGCGCGATAACAATATCCGCCCGCCCCT  >  NZ_CP009273/3247057‑3247146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑