Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3644822	3645125	304	2 [1]	[0] 2	BW25113_RS18155	hypothetical protein

GTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACA  >  NZ_CP009273/3645126‑3645168 |                                           gtgtCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaaca  >  1:281038/1‑43 (MQ=255) gtgtCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaaca  <  2:281038/43‑1 (MQ=255) |                                           GTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACA  >  NZ_CP009273/3645126‑3645168

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑