Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3630994	3631137	144	2 [1]	[1] 3	[pitA]	[pitA]

TGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGC  >  NZ_CP009273/3631072‑3631174                                                                   |                                     tGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCg               <  2:270624/90‑1 (MQ=255)                                                                   gcgcgATGCGTTCTCAGCTCGCCGTGGTTATggcggc  <  1:290944/37‑1 (MQ=255)                                                                   gcgcgATGCGTTCTCAGCTCGCCGTGGTTATggcggc  >  2:290944/1‑37 (MQ=255)                                                                   |                                     TGTTCTACGAAGCCATCAATGGTTTCCATGACACAGCCAACGCCGTGGCAACCGTTATCTATACCCGCGCGATGCGTTCTCAGCTCGCCGTGGTTATGGCGGC  >  NZ_CP009273/3631072‑3631174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑