Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 3633465 3635559 2095 2 [0] [1] 2 uspA–[dtpB] uspA,BW25113_RS26225,BW25113_RS26230,[dtpB]

GCCGCGTTCTTGCTGGGCGGCTATGTGGCAACATTTACCGCGGTGCCGGACAACATTACCGATCCGCTTGAGACGTTGCCCGTCTATACCAACGTGTTTGGTAAGATTGGTCTGGTCACGCTGGGCGTTGCAGTAGTGATGCTGTTGATGGTG  >  NZ_CP009273/3635497‑3635649
                                                               |                                                                                         
gCCGCGTTCTTGCTGGGCGGCTATGTGGCAACATTTACCGCGGTGCCGGACAACATTACCGATCCGCTTGAGACGTTGCCCGTCTATAcc                                                                 >  1:349462/1‑90 (MQ=255)
                                                               ccGCTTGAGACGTTGCCCGTCTATACCAACGTGTTTGGTAAGATTGGTCTGGTCACGCTGGGCGTTGCAGTAGTGATGCTGTTGATGGTg  >  1:322092/1‑90 (MQ=255)
                                                               |                                                                                         
GCCGCGTTCTTGCTGGGCGGCTATGTGGCAACATTTACCGCGGTGCCGGACAACATTACCGATCCGCTTGAGACGTTGCCCGTCTATACCAACGTGTTTGGTAAGATTGGTCTGGTCACGCTGGGCGTTGCAGTAGTGATGCTGTTGATGGTG  >  NZ_CP009273/3635497‑3635649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: