Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3781416	3781427	12	2 [0]	[1] 3	envC	murein hydrolase activator EnvC

CAGGCGGTCAATCCACAGCCGTGGTTGGGAAGATAAGTTTTGTTTCCATTTCGTCGTAACGTTCTTGCATTTGCCGCTCTGTTGGCGCTCTCCTCC  >  NZ_CP009273/3781422‑3781517       |                                                                                          cAGGCGGTCAATCCACAGCCGTGGTTGGGAAGATAAGTTTTGTTTCCATTTCGTCGTAACGTTCTTGCATTTGCCGCTCTGTTGGCGctc        >  2:57400/1‑90 (MQ=255)       gTCAATCCACAGCCGTGGTTGGGAAGATAAGTTTTGTTTCCATTTCGTCGTAACGTTCTTGCATTTGCCGCTCTGTTGGCGCTCtcctcc  >  2:358169/1‑90 (MQ=255)       gTCAATCCACAGCCGGGGTTGGGAAGATAAGTTTTGTTTCCATTTCGTCGTAACGTTCTTGCATTTGCCGCTCTGTTGGCGCTCtcctcc  >  2:164101/1‑90 (MQ=255)       |                                                                                          CAGGCGGTCAATCCACAGCCGTGGTTGGGAAGATAAGTTTTGTTTCCATTTCGTCGTAACGTTCTTGCATTTGCCGCTCTGTTGGCGCTCTCCTCC  >  NZ_CP009273/3781422‑3781517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑