Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2001117	2001197	81	2 [1]	[1] 2	[amyA]–[yedD]	[amyA],[yedD]

GTGGCGTCGGTAACGGCGCTTTATCCAGCGCGGCGGCACACTCTGCTGTCGGGCGATCCACACGCTCCATCGTCATACCATCGTACTCAATGGTGTTACCGTCACGCTCAACCTCGTACAGC  >  NZ_CP009273/2001166‑2001287                                 |                                                                                          gTGGCGTCGGTAACGGCGCTTTATCCAGCGCGGCGGCACACTCTGCTGTCGGGCGATCCACACGCTCCATCGTCATACCATCGTACTCaa                                  >  2:136296/1‑90 (MQ=255)                                 gcggcACACTCTGCTGTCGGGCGATCCACACGCTCCATCGTCATACCATCGTACTCAATGGTGTTACCGTCACGCTCAACCTCGTACAGc  >  2:340733/1‑90 (MQ=255)                                 |                                                                                          GTGGCGTCGGTAACGGCGCTTTATCCAGCGCGGCGGCACACTCTGCTGTCGGGCGATCCACACGCTCCATCGTCATACCATCGTACTCAATGGTGTTACCGTCACGCTCAACCTCGTACAGC  >  NZ_CP009273/2001166‑2001287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑