| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,574,956 | (T)5→4 | coding (92/1158 nt) | ydeM ← | anaerobic sulfatase maturase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,574,952 | 0 | T | . | 100.0% | 29.1 / NA | 8 | coding (96/1158 nt) | ydeM | anaerobic sulfatase maturase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (4/4); total (4/4) | |||||||||||
ACCGCCTTGCCAGGTAAAATAGACCTGATTGCCAGACGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCATTTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGAAAACTGGAGGGCTT > NZ_CP009273/1574865‑1575032 | aCCGCCTTGCCAGGTAAAATAGACCTGATTGCCAGACGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCAttt > 1:94611/1‑90 (MQ=255) aCCTGATTGCCAGACGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCtt > 1:435561/1‑90 (MQ=255) gaACTCTTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTa < 2:525819/90‑1 (MQ=255) ctctTTCAGAGTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACAt < 2:94611/90‑1 (MQ=255) gTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATc > 1:545641/1‑64 (MQ=255) gTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATc < 2:545641/64‑1 (MQ=255) gTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGAAAACTgg > 2:150387/1‑90 (MQ=255) gTGCTGTCATCCATCCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGAAAACTgg > 2:26346/1‑90 (MQ=255) catccatcCA‑TTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGAAAACTGGAGGGCtt < 2:435561/90‑1 (MQ=255) ccatcca‑tTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACa < 1:478058/48‑1 (MQ=255) ccatcca‑tTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACa > 2:478058/1‑48 (MQ=255) atcca‑tTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTaaaa < 1:54470/43‑1 (MQ=255) atcca‑tTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTaaaa > 2:54470/1‑43 (MQ=255) atcca‑tTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGaa < 1:247659/72‑1 (MQ=255) atcca‑tTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGaa > 2:247659/1‑72 (MQ=255) | ACCGCCTTGCCAGGTAAAATAGACCTGATTGCCAGACGCTGCGATATATTGTTTGATGAACTCTTTCAGAGTGCTGTCATCCATCCATTTTTCATGAGTAAACTGCGACTCTTTTTCAAGGTAAAAACAGTAATCACATTTGAGATTACATTGAAAACTGGAGGGCTT > NZ_CP009273/1574865‑1575032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |